PUBLICATIONS
Selected publications
Porath, D., A. Bezryadin, S. de Vries, and C. Dekker, "Direct measurement of electrical transport through DNA molecules". Nature, 2000. 403(6770): p. 635-638.
Cohen, H., C. Nogues, R. Naaman, and D. Porath, "Direct measurement of electrical transport through single DNA molecules of complex sequence". Proceedings of the National Academy of Sciences of the United States of America, 2005. 102(33): p. 11589-11593.
Shapir, E., H. Cohen, A. Calzolari, C. Cavazzoni, D.A. Ryndyk, G. Cuniberti, A. Kotlyar, R. Di Felice, and D. Porath, "Electronic structure of single DNA molecules resolved by transverse scanning tunnelling spectroscopy". Nature Materials, 2008. 7(1): p. 68-74.
Porath, D., "SCANNING TUNNELLING MICROSCOPY A DNA sequence scanned". Nature Nanotechnology, 2009. 4(8): p. 476-477.
Medalsy, I., M. Klein, A. Heyman, O. Shoseyov, F. Remacle, R.D. Levine, and D. Porath, "Logic implementations using a single nanoparticle-protein hybrid". Nature Nanotechnology, 2010. 5(6): p. 451-457.
Livshits, G.I., A. Stern, D. Rotem, N. Borovok, G. Eidelshtein, A. Migliore, E. Penzo, S.J. Wind, R. Di Felice, S.S. Skourtis, J. Carlos Cuevas, L. Gurevich, A.B. Kotlyar, and D. Porath, "Long-range charge transport in single G-quadruplex DNA molecules". Nature Nanotechnology, 2014. 9(12): p. 1040-1046.
Eidelshtein, G., Fardian-Melamed, N., Gutkin, V., Basmanov, D., Klinov, D., Rotem, D., Levi-Kalisman, Y., Porath, D., Kotlyar, A., "Synthesis and Properties of Novel Silver-Containing DNA Molecules", Advanced Materials, 2016, 28(24), p. 4839-4844
Zhuravel, R., Stern, A., Fardian-Melamed, N., Eidelshtein, G., Katrivas, L., Rotem, D., Kotlyar, A.B., and Porath, D., "Advances in Synthesis and Measurement of Charge Transport in DNA-Based Derivatives", 2018, Advanced Materials, 30(41)
Fardian-Melamed, N., Eidelshtein, G., Rotem, D., Kotlyar, A., Porath, D., “Scanning Tunneling Microscopy and Spectroscopy of Novel Silver-Containing DNA Molecules”, 2019, Advanced Materials, 31(35)
Stern, A., Aharon, S., Binyamin, T., Karmi, A., Rotem, D., Etgar, L., Porath, D., “Electrical Characterization of Individual Cesium Lead Halide Perovskite Nanowires Using Conductive AFM“, 2020, Advanced Materials, 32(12)
Zhuravel, R., Huang, H., Polycarpou, G., Polydorides, S., Motamarri, P., Katrivas, L., Dvir Rotem, Sperling, J., Zotti, LA., Kotlyar, AB., Cuevas, JC., Gavini, V., Skourtis, SS. and Porath, D., "Backbone Charge Transport in Double Stranded DNA", 2020. Nature Nanotechnology, In Press.
Chapters in Books
Dvir Rotem, Gennady Eidelshtein, Alexander Kotlyar and Danny Porath, "Novel materials for molecular electronics - synthesis and characterization of long G4-DNA", in Guanine Quartets: Structures and Applications, Eds.: Lea Spindler and Wolfgang Fritzsche, Royal Society of Chemistry, 2013
Izhar Medalsy, Or Dgany, Arnon Heyman, Oded Shoseyov, Mukhles Sowwan. and Danny Porath, “SP1 Protein-Gold Nanoparticle Hybrids as Building Blocks for Nanofabrication of One-Dimensional Systems”, in Bionanotechnology: Global Prospects II monograph, Ed.: David Reisner, CRC Press, 2010.
Rosa Di Felice and Danny Porath, “DNA-Based Nanoelectronics”, in NanoBioTechnology: BioInspired device and materials of the future, Eds: O. Shoseyov and I. Levi, Humana Press, 2007.
Rafael Gutierrez, Danny Porath and Gianaurelio Cuniberti, “DNA conduction: the issue ofstatic disorder, dynamic fluctuations and environmental effects” in Charge transport in disordered solids with application in electronics, Ed.: Sergey Baranovski, Willey & sons, 2006.
Danny Porath, Noa Lapidot and Julio Gomez-Herrero "Charge Transport in DNA-Based Devices". in Introducing Molecular Electronics, Lecture Notes in Physics Series, pp. 411-444, Eds.: G. Cuniberti, G. Fagas and K. Richter. Springer Verlag, 2005.
Porath, D., G. Cuniberti, and R. Di Felice, "Charge transport in DNA-based devices", in Long-Range Charge Transfer in DNA II, p. 183-227. Ed.: G.B. Schuster. Springer 2004.
Journal Papers (peer reviewed)
2020
Stern, A., Aharon, S., Binyamin, T., Karmi, A., Rotem, D., Etgar, L., Porath, D., “Electrical Characterization of Individual Cesium Lead Halide Perovskite Nanowires Using Conductive AFM“, 2020, Advanced Materials, 32(12)
Zhuravel, R., Huang, H., Polycarpou, G., Polydorides, S., Motamarri, P., Katrivas, L., Dvir Rotem, Sperling, J., Zotti, LA., Kotlyar, AB., Cuevas, JC., Gavini, V., Skourtis, SS. and Porath, D., "Backbone Charge Transport in Double Stranded DNA", 2020. Nature Nanotechnology, In Press.
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2019
Fardian-Melamed, N., Eidelshtein, G., Rotem, D., Kotlyar, A., Porath, D., “Temperature Dependence of the STM Morphology and Electronic Level Structure of Silver-Containing DNA“, 2019, Small, 16(5).
Fardian-Melamed, N., Eidelshtein, G., Rotem, D., Kotlyar, A., Porath, D., “Scanning Tunneling Microscopy and Spectroscopy of Novel Silver-Containing DNA Molecules”, 2019, Advanced Materials, 31(35)
Koplovitz, G., Leitus, G., Ghosh, S., Bloom, BP., Yochelis, S., Rotem, D., Vischio, F., Striccoli, M., Fanizza, E., Naaman, R., Waldeck, DH., Porath, D., Paltiel, Y., “Single Domain 10 nm Ferromagnetism Imprinted on Superparamagnetic Nanoparticles Using Chiral Molecules”, 2019, Small, 15(1)
Kolumbus, Y., Zalic, A., Fardian Melamed, N., Barkay, Z., Rotem, D., Porath, D., Steinberg, H., "Crystallographic orientation errors in mechanical exfoliation", Journal of Physics: Condensed Matter, 30(47)
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2018
Zhuravel, R., Stern, A., Fardian-Melamed, N., Eidelshtein, G., Katrivas, L., Rotem, D., Kotlyar, A.B., and Porath, D., "Advances in Synthesis and Measurement of Charge Transport in DNA-Based Derivatives", 2018, Advanced Materials, 30(41)
Al‐Bustami, H., Koplovitz, G., Primc, D., Yochelis, S., Capua, E., Porath, D., Naaman, R., and Paltiel, Y., "Single Nanoparticle Magnetic Spin Memristor", 2018, Small, 14(30)
Stern, A., Azoubel, S., Sachyani, E., Livshits, G.I., Rotem, D., Magdassi, S., and Porath, D., "Conductivity Enhancement of Transparent 2D Carbon Nanotube Networks Occurs by Resistance Reduction in All Junctions", 2018, The Journal of Physical Chemistry C, 122(26), 14872-14876
Stern, A., Eidelshtein, G., Zhuravel, R., Livshits, G.I., Rotem, D., Kotlyar, A., and Porath, D., “Highly Conductive Thin Uniform Gold‐Coated DNA Nanowires“, 2017, Advanced Materials, 30(26)
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2017
Koplovitz, G., Primc, D., Ben Dor, O., Yochelis, S., Rotem, D., Porath, D., Paltiel, Y. "Magnetic Nanoplatelet‐Based Spin Memory Device Operating at Ambient Temperatures", 2017, Advanced Materials, 29(17)
Amgar, D., Stern, A., Rotem, D., Porath, D., Etgar, L., "Tunable Length and Optical Properties of CsPbX3 (X= Cl, Br, I) Nanowires with a Few Unit Cells", 2017, Nano Letters, 17, 1007-1013
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2016
Guterman, T.,Kornreich, M., Stern, A., Adler-Abramovich, L., Porath, D., Beck, R., Shimon, L. J. W., Gazit, E. “Formation of bacterial pilus-like nanofibres by designed minimalistic self-assembling peptides”, 2016, Nature Communications, 7
Zhuravel, R., Amit, E., Elbaz, S., Rotem, D., Chen, Y. J., Friedler, A.,Yitzchaik, S., Porath, D. “Atomic force microscopy characterization of kinase-mediated phosphorylation of a peptide monolayer”, 2016, Scientific Reports, 6
Eidelshtein, G., Fardian-Melamed, N., Gutkin, V., Basmanov, D., Klinov, D., Rotem, D., Levi-Kalisman, Y., Porath, D., Kotlyar, A., "Synthesis and Properties of Novel Silver-Containing DNA Molecules", Advanced Materials, 2016, 28(24), p. 4839-4844
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2015
Amit, E., Obena, R., Wang, Y.T., Zhuravel, R., Reyes, A.J.F., Elbaz, S., Rotem, D., Porath, D., Friedler, A., Chen, Y.J. and Yitzchaik, S., "Integrating proteomics with electrochemistry for identifying kinase biomarkers". Chemical Science, 2015. 6(8), p. 4756-4766.
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2014
Livshits, G.I., A. Stern, D. Rotem, N. Borovok, G. Eidelshtein, A. Migliore, E. Penzo, S.J. Wind, R. Di Felice, S.S. Skourtis, J. Carlos Cuevas, L. Gurevich, A.B. Kotlyar, and D. Porath, "Long-range charge transport in single G-quadruplex DNA molecules". Nature Nanotechnology, 2014. 9(12): p. 1040-1046.
Livshits, G.I., J. Ghabboun, N. Borovok, A.B. Kotlyar, and D. Porath, "Comparative Electrostatic Force Microscopy of Tetra- and Intra-Molecular G4-DNA". Advanced Materials, 2014. 26(29): p. 4981-4985.
Albrecht, A., G. Koplovitz, A. Retzker, F. Jelezko, S. Yochelis, D. Porath, Y. Nevo, O. Shoseyov, Y. Paltiel, and M.B. Plenio, "Self-assembling hybrid diamond-biological quantum devices". New Journal of Physics, 2014. 16.
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2013
Roger-Eitan, I., K. Liu, G.I. Livshits, N. Borovok, D. Rotem, A.B. Kotlyar, and D. Porath, "High-Resolution Scanning Tunneling Microscopy Imaging of Biotin-Avidin-G4-DNA Molecules". Journal of Physical Chemistry C, 2013. 117(43): p. 22462-22465.
Wind, SJ., E. Penzo, M. Palma, R. Wang, T. Fazio, D. Porath, D. Rotem, G. Livshits, A. Stern, "Integrating DNA with Functional Nanomaterials", Journal of Self-Assembly and Molecular Electronics, 2013. 1(2).
Dachlika, H., A. Stern, D. Rotem, and D. Porath, "Formation of Dimers Composed of a Single Short dsDNA Connecting Two Gold Nanoparticles", Journal of Self-Assembly and Molecular Electronics, 2013. 1(1):p. 85-99.
Guy, S., D. Rotem, Z. Hayouka, R. Gabizon, A. Levin, L. Zemel, A. Loyter, D. Porath, and A. Friedler, "Monitoring the HIV-1 integrase enzymatic activity using atomic force microscopy in a 2LTR system". Chemical Communications, 2013. 49(30): p. 3113-3115.
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2012
Stern, A., D. Rotem, I. Popov, and D. Porath, "Quasi 3D imaging of DNA-gold nanoparticle tetrahedral structures". Journal of Physics-Condensed Matter, 2012. 24(16).
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2011
Zikich, D., K. Liu, L. Sagiv, D. Porath, and A. Kotlyar, "I-Motif Nanospheres: Unusual Self-Assembly of Long Cytosine Strands". Small, 2011. 7(8): p. 1029-1034.
Shapir, E., G. Brancolini, T. Molotsky, A.B. Kotlyar, R. Di Felice, and D. Porath, "Energy Gap Reduction in DNA by Complexation with Metal Ions". Advanced Materials, 2011. 23(37): p. 4290-4294.
Frasconi, M., A. Heyman, I. Medalsy, D. Porath, F. Mazzei, and O. Shoseyoy, "Wiring of Redox Enzymes on Three Dimensional Self-Assembled Molecular Scaffold". Langmuir, 2011. 27(20): p. 12606-12613.
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2010
Shapir, E., L. Sagiv, T. Molotsky, A.B. Kotlyar, R. Di Felice, and D. Porath, "Electronic Structure of G4-DNA by Scanning Tunneling Spectroscopy". Journal of Physical Chemistry C, 2010. 114(50): p. 22079-22084.
Medalsy, I., M. Klein, A. Heyman, O. Shoseyov, F. Remacle, R.D. Levine, and D. Porath, "Logic implementations using a single nanoparticle-protein hybrid". Nature Nanotechnology, 2010. 5(6): p. 451-457.
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2009
Ryndyk, D.A., E. Shapir, D. Porath, A. Calzolari, R. Di Felice, and G. Cuniberti, "Scanning Tunneling Spectroscopy of Single DNA Molecules". Acs Nano, 2009. 3(7): p. 1651-1656.
Porath, D., "SCANNING TUNNELLING MICROSCOPY A DNA sequence scanned". Nature Nanotechnology, 2009. 4(8): p. 476-477.
Heyman, A., I. Medalsy, O.B. Or, O. Dgany, M. Gottlieb, D. Porath, and O. Shoseyov, "Protein Scaffold Engineering Towards Tunable Surface Attachment". Angewandte Chemie-International Edition, 2009. 48(49): p. 9290-9294.
Heyman, A., I. Medalsy, O. Dgany, D. Porath, G. Markovich, and O. Shoseyov, "Float and Compress: Honeycomb-like Array of a Highly Stable Protein Scaffold". Langmuir, 2009. 25(9): p. 5226-5229.
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2008
Shapir, E., L. Sagiv, N. Borovok, T. Molotski, A.B. Kotlyar, and D. Porath, "High-resolution STM imaging of novel single G4-DNA molecules". Journal of Physical Chemistry B, 2008. 112(31): p. 9267-9269.
Shapir, E., H. Cohen, A. Calzolari, C. Cavazzoni, D.A. Ryndyk, G. Cuniberti, A. Kotlyar, R. Di Felice, and D. Porath, "Electronic structure of single DNA molecules resolved by transverse scanning tunnelling spectroscopy". Nature Materials, 2008. 7(1): p. 68-74.
Medalsy, I., O. Dgany, M. Sowwan, H. Cohen, A. Yukashevska, S.G. Wolf, A. Wolf, A. Koster, O. Almog, I. Marton, Y. Pouny, A. Altman, O.S. Hoseyov, and D. Porath, "SP1 protein-based nanostructures and arrays". Nano Letters, 2008. 8(2): p. 473-477.
Borovok, N., T. Molotsky, J. Ghabboun, D. Porath, and A. Kotlyar, "Efficient procedure of preparation and properties of long uniform G4-DNA nanowires". Analytical Biochemistry, 2008. 374(1): p. 71-78.
Borovok, N., N. Iram, D. Zikich, J. Ghabboun, G.I. Livshits, D. Porath, and A.B. Kotlyar, "Assembling of G-strands into novel tetra-molecular parallel G4-DNA nanostructures using avidinbiotin recognition". Nucleic Acids Research, 2008. 36(15): p. 5050-5060.
Bardavid, Y., J. Ghabboun, D. Porath, A.B. Kotylar, and S. Yitzchaik, "Formation of polyaniline layer on DNA by electrochemical polymerization". Polymer, 2008. 49(9): p. 2217-2222.
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2007
Ullien, D., H. Cohen, and D. Porath, "The effect of the number of parallel DNA molecules on electric charge transport through 'standing DNA'". Nanotechnology, 2007. 18(42).
Ghabboun, J., M. Sowwan, H. Cohen, T. Molotsky, N. Borovok, B. Dwir, E. Kapon, A. Kotlyar, and D. Porath, "Specific and efficient adsorption of phosphorothioated DNA on Au-based surfaces and electrodes". Applied Physics Letters, 2007. 91(17).
Cohen, H., T. Sapir, N. Borovok, T. Molotsky, R. Di Felice, A.B. Kotlyar, and D. Porath, "Polarizability of G4-DNA observed by electrostatic force microscopy measurements". Nano Letters, 2007. 7(4): p. 981-986.
Borovok, N., T. Molotsky, J. Ghabboun, H. Cohen, D. Porath, and A. Kotlyar, "Poly(dG)-poly(dC) DNA appears shorter than poly(dA)-poly(dT) and possibly adopts an A-related conformation on a mica surface under ambient conditions". Febs Letters, 2007. 581(30): p. 5843-5846.
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2006
Shapir, E., H. Cohen, N. Borovok, A.B. Kotlyar, and D. Porath, "High-resolution STM imaging of novel poly(G)-poly) DNA molecules". Journal of Physical Chemistry B, 2006. 110(9): p. 4430-4433.
Schuster, G., R. Naaman, A. Kornyshev, E. Calvo, N. Tao, C. Barbero, J. Toppari, D. Porath, T. Bjornholm, R. McCreery, F. Remacle, M. Bryce, S. Lindsay, D. Smith, H. Van der Zant, C. Rovira, D. Fermin, S. Higgins, S. Kubatkin, J. Ulstrup, S. Larsson, J. Davis, R. Nichols, M. Rampi, A. Harriman, A. Kuznetsov, Brust, and H. Van Zalinge, "General discussion". Faraday Discussions, 2006. 131: p. 393-402.
Kim, D.-H., E. Shapir, H. Jeong, D. Porath, and J. Yi, "Complex ion-distribution induced contrast reversal in STM imaging of DNA". Physical Review B, 2006. 73(23).
Gutierrez, R., S. Mohapatra, H. Cohen, D. Porath, and G. Cuniberti, "Inelastic quantum transport in a ladder model: Implications for DNA conduction and comparison to experiments on suspended DNA oligomers". Physical Review B, 2006. 74(23).
Cohen, H., C. Nogues, D. Ullien, S. Daube, R. Naaman, and D. Porath, "Electrical characterization of self-assembled single- and double-stranded DNA monolayers using conductive AFM". Faraday Discussions, 2006. 131: p. 367-376.
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2005
Shapir, E., J.Y. Yi, H. Cohen, A.B. Kotlyar, G. Cuniberti, and D. Porath, "The puzzle of contrast inversion in DNA STM imaging". Journal of Physical Chemistry B, 2005. 109(30): p. 14270-14274.
Kotlyar, A.B., N. Borovok, T. Molotsky, H. Cohen, E. Shapir, and D. Porath, "Long, monomolecular guanine-based nanowires". Advanced Materials, 2005. 17(15): p. 1901-1905.
Cohen, H., C. Nogues, R. Naaman, and D. Porath, "Direct measurement of electrical transport through single DNA molecules of complex sequence". Proceedings of the National Academy of Sciences of the United States of America, 2005. 102(33): p. 11589-11593.
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2004
Calev, Y., H. Cohen, G. Cuniberti, A. Nitzan, and D. Porath, "Tight-binding description of the STM image of molecular chains". Israel Journal of Chemistry, 2004. 44(1-3): p. 133-143.
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2002
Cuniberti, G., L. Craco, D. Porath, and C. Dekker, "Backbone-induced semiconducting behavior in short DNA wires". Physical Review B, 2002. 65(24).
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2000
Porath, D., A. Bezryadin, S. de Vries, and C. Dekker, "Direct measurement of electrical transport through DNA molecules". Nature, 2000. 403(6770): p. 635-638.
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1999
Alperson, B., I. Rubinstein, G. Hodes, D. Porath, and O. Millo, "Energy level tunneling spectroscopy and single electron charging in individual CdSe quantum dots". Applied Physics Letters, 1999. 75(12): p. 1751-1753.
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1998
Millo, O., Y. Levi, and D. Porath, "Resonant tunneling through discrete electronic levels of a C-60 molecule in the presence of charging effects". Acta Physica Polonica A, 1998. 93(2): p. 431-435.
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1997
Porath, D. and O. Millo, "Single electron tunneling and level spectroscopy of isolated C-60 molecules". Journal of Applied Physics, 1997. 81(5): p. 2241-2244.
Porath, D., Y. Levi, M. Tarabiah, and O. Millo, "Tunneling spectroscopy of isolated C-60 molecules in the presence of charging effects". Physical Review B, 1997. 56(15): p. 9829-9833.
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1996
Porath, D., O. Millo, and J.I. Gersten, "Scanning tunneling microscopy studies and computer simulations of annealing of gold films". Journal of Vacuum Science & Technology B, 1996. 14(1): p. 30-37.
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1995
Porath, D., E. Barsadeh, M. Wolovelsky, A. Grayevsky, Y. Goldstein, and O. Millo, "ANNEALING STUDY OF GOLD-FILMS USING SCANNING-TUNNELING-MICROSCOPY". Journal of Vacuum Science & Technology a-Vacuum Surfaces and Films, 1995. 13(3): p. 1165-1170.
Barsadeh, E., Y. Goldstein, M. Wolovelsky, D. Porath, C. Zhang, H. Deng, B. Abeles, and O. Millo, "LOW-TEMPERATURE SCANNING-TUNNELING-MICROSCOPY STUDIES OF GRANULAR METAL-FILMS". Journal of Vacuum Science & Technology B, 1995. 13(3): p. 1084-1088.
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1994
Porath, D., A. Grayevsky, N. Kaplan, D. Shaltiel, U. Yaron, and E. Walker, "OBSERVATIONS RELATED TO HYDROGEN IN POWDER AND SINGLE-CRYSTAL SAMPLES OF YBA2CU3O7-DELTA". Journal of Alloys and Compounds, 1994. 204(1-2): p. 79-82.
Porath, D., Y. Goldstein, A. Grayevsky, and O. Millo, "SCANNING-TUNNELING-MICROSCOPY STUDIES OF ANNEALING OF GOLD-FILMS". Surface Science, 1994. 321(1-2): p. 81-88.